PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00460.80
Common NameJCGZ_25628
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family G2-like
Protein Properties Length: 240aa    MW: 27684.9 Da    PI: 9.0571
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00460.80genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.33.4e-28176229255
        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    +r+ Wtp LH++Fv a++ LGG+e+AtPk+i+++m+++gLt ++vkSHLQkYR+
  Jcr4S00460.80 176 NRRSWTPPLHAKFVMALHMLGGPEVATPKQIRDHMQIDGLTTNQVKSHLQKYRI 229
                    799**************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.53E-16173232IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-23175230IPR009057Homeodomain-like
TIGRFAMsTIGR015577.2E-23175229IPR006447Myb domain, plants
PfamPF002498.4E-9177228IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MSSSSPFELT LGLKLSYVPK SLSELIRDLS KTESDEVKLL VLNDQLLKYQ EELISVKVFK  60
QDLPQCRLLL IDAVEKLKEE INKIKIGMGL EAAERCLAKD AIATKKRDFE EQQSFLDLNN  120
PSFDQQWTNP THHRDKRQAG LFGPMPRAEE VPMNLNLNAT EEPKLKPLTQ PIWRNNRRSW  180
TPPLHAKFVM ALHMLGGPEV ATPKQIRDHM QIDGLTTNQV KSHLQKYRII WRSSQYNTTE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012088113.11e-179PREDICTED: uncharacterized protein LOC105646787
TrEMBLA0A067JKC61e-179A0A067JKC6_JATCU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148661012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.12e-27G2-like family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]